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Infinium to SNP

This program helps to convert Infinium 1M-duo chip output text files from Bead Studio to '*.SNP' files which has the format shoown below:

Column 1Column 2Column 3Column 4 Column 5Column 6Column 7
SNP nameChromosome Physical Position Patient n ID Patient n genotype Patient n+1 ID Patient n+1 genotype
RS10938 14001012016609 John AA Fred BB
RS546784001012503078 John AB Fred NoCall

Table 1

To use the program, place all your data files in a single folder (as text files) and press the 'Select' button and then select the data files folder. The program should then read the files and if completed without error the 'Export' button will become active. To create the SNP file press the 'Export' button and enter the new files name. The data file will then be created.

insilicase icon This program can be downloaded from here.

Computer requirements

This program runs on Microsoft Windows, using the .NET 2.0 environment which can be obtained from here.



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