deus ex computa
     Skip Navigation Links.



AgileGeneFilter allows sequence variants exported from AgileVariantViewer or AgileAnnotator to be filtered, by first identifying the proteins that are affected by the sequence variants and then performing a textual data search on these proteins, using information downloaded from the UNI-Prot web page. The text search is composed of two parts:

  • Keyword search against the description of the protein's function, structure and cellular localisation as stated by UNI-Prot. The keyword search is also performed against gene name, the protein family's description and the references as used by UNI-Prot
  • Matching gene ontology terms selected by the user against those linked to the protein by UNI-Prot

Guide explaining how to use AgileGeneFilter:

AgileGeneFilter's user guide can be found here.


AgileGeneFilter program can be downloaded here

Copyright © 2020 Insilicase.