Insilicase
deus ex computa
     Skip Navigation Links.
Collapse HomeHome
Collapse Desktop programsDesktop programs
Expand Sequence AnalysisSequence Analysis
Collapse NGS AnalysisNGS Analysis
Expand Mapping softwareMapping software
Expand MiscellaneousMiscellaneous
Expand Web programsWeb programs
Expand Lab calculationsLab calculations
Expand HistoryHistory

AgileGeneFilter

Description

AgileGeneFilter allows sequence variants exported from AgileVariantViewer or AgileAnnotator to be filtered, by first identifying the proteins that are affected by the sequence variants and then performing a textual data search on these proteins, using information downloaded from the UNI-Prot web page. The text search is composed of two parts:

  • Keyword search against the description of the protein's function, structure and cellular localisation as stated by UNI-Prot. The keyword search is also performed against gene name, the protein family's description and the references as used by UNI-Prot
  • Matching gene ontology terms selected by the user against those linked to the protein by UNI-Prot

Guide explaining how to use AgileGeneFilter:

AgileGeneFilter's user guide can be found here.

Download

AgileGeneFilter program can be downloaded here



Copyright © 2020 Insilicase.